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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931107.1_cds_XP_016478000.1_69677
CDS Infomation

[gene=LOC107799406] [db_xref=GeneID:107799406] [protein=auxin response factor 9-like] [protein_id=XP_016478000.1] [location=join(93636..93653,93744..93896,93990..94074,94153..94243,94565..94729,94858..94971,95082..95154,95247..95400,95484..96031,96138..96325,96429..96546)] [gbkey=CDS]
Sequence

ATGCCCGAAGCAGCTGAACAAGCCGAACCGACTAGTCAAGATCCATGCCCGCCCGAGCCT
CAGAGGCCTAAAGTTCATTCCTTCTGCAAAGTTTTGACTGCATCGGATACGAGCACTCAT
GGCGGATTTTCTGTTCTTAGGAAACATGCTAATGAATGTCTTCCACCCCTGGACATGAAC
CAGCAGACTCCAACTCAAGAATTGATCGCGAAAGACCTTCATGGTACCGAGTGGCACTTT
AAACATATATTTAGAGGCCAACCTCGGAGACATTTACTTACCACAGGGTGGAGTACCTTT
GTTTCTTCAAAGCGATTAGTTGCTGGGGATTCTTTTGTATTCTTGAGGGGTGGGAATGGA
GAACTACGAGTTGGTGTTAGACGGCTTGCTCGCCAGCAGAGCTCGATGCCATCATCGGTG
ATATCAAGTCAGAGCATGCACCTAGGAGTCCTAGCTACAGCATCTCATCCTGTTACAACC
CAGACCTTGTTTGTTGTTTACTACAAGCCGAGAACCAGTCAGTTTATCATTGGCCTCAAC
AAATACTTAGAGACTGTTAAACATGGATATTCAGTTGGCATGCGGTTTAAGATGCAGTTT
GAAGGAGAAGAGAGTCCTGAGAGAAGATTTACCGGCACTATAGTTGGGATTGAAGATCTT
TCCTCACAGTGGAAAGATTCTACATGGCGATCTTTGAAGGTTCAATGGGACGAGCCGGCA
TCCATTTCAAGACCCGACAGAGTTTCTCCTTGGGAAATAGAACCTTTTGTGGTTTCAGTT
CCGAATCCACTTGTCCCGCCAATGGCAGGGAAGAATAAAAGGCATCGACCACATAGTGAA
GCCAAAATTTCAGAACCTGCATCCTCAATTGCATCAGCGGTTTGGAATCCTTCCACTGAC
TCGCCTCAATTTAACACCACTGGCATCAACAGCAGTACTAATTGCATGCTAACGTCTCAT
ACAGACAGTGTTTGTGGTTGGCGGCTTCCTCATTTACATACTTCTTCAAGTATGCTTGTG
GATGAGACGGAAGACACTAAAAGTGCTTCAGCTTGGTCTGGTTTTCCAAGCGTTTTGTCC
TCGCAATTCAGTAATGGGACTAATCAGCCGATTCTTAGTCCTACCGATGAGAGAAAATGT
GATACCATCACAACCTGTAGATTATTTGGTATTGACTTGAAAAGTACCTTAATCAGCACT
ACCGAAGCACCACTACCAAAACCAGCCAACATTTCTAATGTCTTTGCCGAGAGAGCATCT
CCAAACACAGTGCCTGCTTTTGATTCAGATCAAAACTCTGATCTTTCAATTGATTTCAAA
GATCAAAAGCAAGGCCAGTTGCAGTTACTCCTAAAAGAGGTTCAAAGCAAGCAAAATTGT
TCCACCCGGAGCCGCACCAAGGTTCAAATGCAAGGGGTAGCTGTGGGTCGTGCAGTGGAT
TTAACCGCACTGAAAGGATATAATGAGCTTATAAAGGAACTCGAGGAGATGTTTGAAATC
CAAGGAGAACTTCACCCGCGAAATAAATGGGAGATGGTTTTTACAGATGATGAAGGAGAT
ATGATGCTTATGGGTGATCATCCATGGCTAGAGTTTTGCAATGTGGTGAGGAGGATATTC
ATTGTTTCCAGTCAAGATATGAAAAAATGGAGTGCAGGAAACAAAGTTCTGTCGTGTGCA
GCAGACAATGAGGCGATTGCTTTCTAA

Peptide Sequence

PEP ID

XP_016478000.1
PEP Infomation

PREDICTED: auxin response factor 9-like [Nicotiana tabacum]
Sequence

MPEAAEQAEPTSQDPCPPEPQRPKVHSFCKVLTASDTSTHGGFSVLRKHANECLPPLDMN
QQTPTQELIAKDLHGTEWHFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDSFVFLRGGNG
ELRVGVRRLARQQSSMPSSVISSQSMHLGVLATASHPVTTQTLFVVYYKPRTSQFIIGLN
KYLETVKHGYSVGMRFKMQFEGEESPERRFTGTIVGIEDLSSQWKDSTWRSLKVQWDEPA
SISRPDRVSPWEIEPFVVSVPNPLVPPMAGKNKRHRPHSEAKISEPASSIASAVWNPSTD
SPQFNTTGINSSTNCMLTSHTDSVCGWRLPHLHTSSSMLVDETEDTKSASAWSGFPSVLS
SQFSNGTNQPILSPTDERKCDTITTCRLFGIDLKSTLISTTEAPLPKPANISNVFAERAS
PNTVPAFDSDQNSDLSIDFKDQKQGQLQLLLKEVQSKQNCSTRSRTKVQMQGVAVGRAVD
LTALKGYNELIKELEEMFEIQGELHPRNKWEMVFTDDEGDMMLMGDHPWLEFCNVVRRIF
IVSSQDMKKWSAGNKVLSCAADNEAIAF

Transcript Sequence

Gene sequence data has not been registered.